Summary

Basic Statistics

Overall Categorization

Attributes of FASTQ

Alphabet Frequency & GC content

Quality Statistics

Distribution of Bases' Quality Values

Distribution of Reads' MinimaQ Values

Covergae of Reads with Sufficient High-Quality Bases

Notes: The report requires Internet connection to show the interactive charts of distribuions made by Google chart.

worm_PE620

Name	AreaFreq
% of reads whose bases are all Q20 & above	3.2%
% of reads whose bases are all Q15 & above	6.9%
% of reads whose bases are all Q10 & above	99.8%

Name	Coverage of reads	Remark
% of High-quality reads Coverage of reads that 100% of their bases with Q20 & above	3.2%	%HighQ(20) >= 100% (i.e., MinimaQ>=20)
Coverage of reads that >= 95% of their bases with Q20 & above	57.7%	%HighQ(20) >= 95%
Coverage of reads that >= 90% of their bases with Q20 & above	77.6%	%HighQ(20) >= 90%
Coverage of reads that >= 90% of their bases with Q15 & above	96.9%	%HighQ(15) >= 90%
% of Poor-quality reads Coverage of reads that > 10% of their bases with Q14 & less	3.1%	1 - {%HighQ(15) >= 90%}